George Mason University : Bioinformatics and Computational Biology : Jobs

Job Opportunities

Posted 08/27/08

Tenure-track Position: Mathematics
Hope College

The Hope College Department of Mathematics invites applications for one tenure-track position in mathematics to begin Fall 2009. Strong applicants from all fields of mathematics are welcome, and those with interests in mathematical biology are especially encouraged. PhD required. Primary responsibilities include teaching (typically 5 courses per year) and research (including working with undergraduates).

HOPE COLLEGE is a Christian coeducational residential liberal arts undergraduate college affiliated with the Reformed Church in America; has over 3,000 students (3,045 FTE) and 248 FTE faculty; is a member of the Great Lakes Colleges Association; is accredited by NCA, NCATE, ACS, NASAD, NASD, NASM, NAST, CCNE, CSWE, EAC of ABET, and CAAHEP, and is located in a city of 35,000 enriched by a significant Latino, Asian and African American population in a rapidly growing urban area of over 100,000; is near Lake Michigan, within short driving distance of Grand Rapids (over 500,000) and relatively close to Ann Arbor and Chicago. Additional information about Hope College can be found on the Web at http://www.hope.edu/.

Candidates should demonstrate an ability to combine excellence in classroom teaching with scholarly activity, along with a commitment to the character and goals of a liberal arts college with a Christian perspective. Given the ecumenical character of Hope College, we encourage applicants from a broad range of Christian denominations and traditions.

Send a resume, unofficial transcript, a statement of teaching philosophy, a brief research statement, and three letters of recommendation (at least one addressing teaching ability) to Search Committee, Department of Mathematics, Hope College, Holland, MI 49422-9000. Review of applications will begin December 15, 2008, although late applications will be considered if the position has not been filled.

Hope College places a high priority on sustaining a supportive environment that recognizes the importance of having a diverse faculty in order to best prepare our students for successful careers in our multi-cultural nation and global community. Applications from qualified persons with diverse backgrounds and cultures, including women and persons of color are, therefore, especially welcomed. Hope College complies with federal and state requirements for nondiscrimination in employment.

Posted 08/27/08

Senior Post-doctoral Research Associate
The University of Coimbra

Senior post-doctoral research associate in computational biology (Center for Neuroscience and Cell Biology, The University of Coimbra)

Financed by the Portuguese government initiative for research jobs Ciência 2008, the Center for Neurosciences and Cell Biology (CNC, University of Coimbra) wishes to appoint one research scientist in the area of Computational Biology at the Auxiliary Investigator level. The salary will be in the range of 3040/month/14 months/year. Appointments are held for 5 years, submitted to yearly renewals.

Candidates must have a background in engineering (physical, chemical, biomedical, electrical or informatics), physics, or applied mathematics, and a strong publication record. A PhD degree at the time of application and documentable strong mathematical and computer programming skills are additional mandatory requirements. Two or more years of post-doctoral experience and documentable working experience in parameter estimation / model discrimination from time series of biochemical variables are strongly preferred.

The successful candidate is expected to develop effective methods, algorithms and software for parameter estimation and model discrimination from time series of metabolomic and tracer data. S/he will be responsible for effective implementation of all the necessary mathematical/computational steps in this process, from optimization of experimental design to error estimation, and must be willing to collaborate with modelers and experimentalists towards designing successful experiments. S/he is also expected to collaborate with other members of the team towards developing improved methods for systems-analysis of biochemical processes. The position requires a self-motivated and proactive attitude towards research work, initiative for exploring new biologically motivated problems, and willingness to explore synergies with the research environment.

The successful candidate will be integrated in the Molecular Systems Biology Group (MSBG) at CNC. MSBG is doing highly relevant research in systems analysis of metabolic processes and towards understanding the design principles of biochemical networks [see Alves, Antunes & Salvador (2006) Nature Biotechnol. 24:667-672; Salvador & Savageau (2006) Proc. Natl. Acad. Sci. USA 103:2226-2231; Salvador & Savageau (2003) Proc. Natl. Acad. Sci. USA 100:14463-14468]. It is leading an ambitious research program towards discovering and experimentally validating design principles of highly prevalent metabolic circuits, and collaborates with strong groups at the University of California at Davis, the Massachusetts Institute of Technology (MIT), and the University of Pennsylvania, among others.

Applicants should forward, no later than September 10, 2008, a cover letter detailing motivation, training, work experience and future plans, a curriculum vitae, a publications list, and three references or recommendation letters to the following address: silviacnc@gmail.com. All applications must clearly indicate job reference C2008-7/2008:MSBG.

Please address any legal/formal questions about this position to silviacnc@gmail.com, and scientific questions to salvador@cnc.uc.pt.

Posted 08/27/08

Positions in Applied Mathematics
McGill University, Canada

The Department of Mathematics and Statistics at McGill University, Montreal Canada invites applications for as many as three tenure-track positions in applied mathematics. While appointments are expected to be made at the Assistant Professor level, applicants for a senior position will be considered. The search will be conducted in the area of differential equations (partial, stochastic or functional) and dynamical systems, with numerical analysis of differential equations as the top priority area. We are particularly eager to hear from candidates whose work combines analytical and computational aspects, but also welcome candidates whose work is primarily analytic but driven in a significant way by applications. In view of a University-wide initiative in Systems Biology, this is an application area of potential interest for part of the search.

For further information about applied mathematics at McGill, see http://www.math.mcgill.ca/research/applied_mathematics. Candidates must have a doctoral degree at the date of appointment and a strong background in mathematics. They are expected to have demonstrated the capacity for independent research of excellent quality. Selection criteria include research accomplishments, as well as potential contributions to the Department's educational programs at the graduate and undergraduate levels.

Applications must include a curriculum vitae, a list of publications, a research outline, an account of teaching experience, a statement on teaching, and the names, phone numbers and e-mail addresses of at least four references (with one addressin g the teaching record). Submissions should be made through MathJobs.Org. Candidates are also encouraged to provide web links for up to three selected reprints or preprints, or to upload them to MathJobs.Org. Candidates must ensure that letters of reference are submitted either through MathJobs.Org or mailed to the following address: Professor Georg Schmidt, Chair, Applied Mathematics Search Committee, Department of Mathematics and Statistics, McGill University, 805 Sherbrooke Street West, Montreal, Quebec H3A 2K6, Canada.

To ensure full consideration, complete applications including letters of reference should be received by November 30, 2008, but later applications may be considered.

McGill University is committed to equity in employment and diversity. It welcomes applications from indigenous peoples, visible minorities, ethnic minorities, persons with disabilities, women, persons of minority sexual orientations and gender identities and others who may contribute to further diversification. All qualified applicants are encouraged to apply; however, in accordance with Canadian immigration requirements, priority will be given to Canadian citizens and permanent residents of Canada.

Posted 08/27/08

Assistant Professor in Mathematics
University of North Carolina at Charlotte

Tenure track position at the Assistant Professor level in Mathematics beginning in August 2009. Candidates must have a Ph.D. in mathematics or related field, demonstrated strength in research, and an ability to teach in a diverse environment. Desired is a researcher in computational multiscale modeling to complement the existing strengths of the research group in computational mathematics and analysis. Preference will be given to applicants with strong interdisciplinary research experience and potential for external funding.

Please apply on-line at http://jobs.uncc.edu include your curriculum vita and a statement about teaching and research. Also arrange to have 3 letters of reference sent to Alan Dow, Department of Mathematics and Statistics, University of North Carolina at Charlotte, Charlotte, NC 28223. Review of applications will begin on December 1, 2009 and will continue until the position is filled. Contact Alan Dow at adow@uncc.edu for more information. UNC Charlotte strives to create an academic climate in which the dignity of all individuals is respected and maintained. Therefore, we celebrate diversity that includes, but is not limited to ability/disability, age, culture, ethnicity, gender, language, race, religion, sexual orientation, and socio-economic status. AA/EOE.

Posted 08/27/08

Open Position - Endowed Chair
SMU

Applications are invited for the Clements Chair of Mathematics to begin in the fall semester of 2009. Preference will be given to senior scholars with outstanding records of research who also have a strong commitment to teaching including an established history of advising Ph.D. theses. Applicants in all areas of applied and computational mathematics are encouraged. The Department of Mathematics, which offers an active doctoral program in applied and computational mathematics, is in an exciting period of transition having hired four faculty last year. Visit http://www.smu.edu/math for more information about the department.

To apply, send a letter of application with a curriculum vitae, a list of publications, research and teaching statements and the names of three references (references will not be contacted before receiving approval of the candidate) to: The Faculty Search Committee, Department of Mathematics, Southern Methodist University, P.O. Box 750156, Dallas, Texas, 75275-0156. The Search Committee can be contacted by sending e-mail to mathsearch@mail.smu.edu. (Tel: (214)768-2452; Fax: (214)768-2355).

To ensure full consideration for the position, the application must be received by January 9, 2009, but the committee will continue to accept applications until the position is filled. The committee will notify applicants of its employment decision after the position is filled.

SMU, a private university with an engineering school, is situated in a quiet residential section of Dallas. Dallas is home to the University of Texas Southwestern Medical Center and its new Systems Biology Center.

SMU will not discriminate on the basis of race,color, religion, national origin, sex, age, disability or veteran status. SMU is also committed to nondiscrimination on the basis of sexual orientation.

Posted 08/21/08

Biostatistical analyst, programmer
NIH

Immediate opening for a new biostatistical analyst, programmer. The position is full time, located on the NIH campus in Bethesda MD. Please click here for a full description. Please have anyone interested send me their CV as soon as possible.

Posted 08/19/08

Tenure-track Faculty Positions
RCIS-Okayama University

Tenure-track Faculty Positions in RCIS-Okayama University

Okayama University (Japan), Graduate School of Natural Science and Technology, and Graduate School of Environmental Science, is seeking candidates for eleven tenure-track faculty positions at assistant professor level. Okayama University are particularly interested in ambitious candidates who are willing to develop new interdisciplinary sciences. Candidates should have a PhD degree in a relevant discipline. The positions are available from November 1, 2008 at the Research Core for Interdisciplinary Sciences (RCIS), Okayama University. Applications should be made on the form provided and sent to RCIS by e-mail (core-form@adm.okayama-u.ac.jp). All application materials must arrive no later than 17:00 Japan time on September 19 (Fri), 2008.

"Mathematical Science for Medicine" is contained in new interdisciplinary fields in the guideline of the application.

For guideline for application and application form, please see:
http://www.okayama-u.ac.jp/en/topic/topic200708.html.

Posted 08/19/08

Tenure-track Assistant Professor
Colgate University

Systems Biologist, Colgate University

We seek a tenure-stream Assistant Professor for a joint position in Biology and Mathematics to start August 2009. The successful candidate will develop a Systems Biology course, contribute to courses in Biology and/or Mathematics, participate in University-wide programs, and mentor undergraduate research students.

Please forward an application with curriculum vitae, transcripts, teaching philosophy, and research interests to Dr. Ken Belanger, Biology, Colgate University, Hamilton, NY 13346-1398 and also have three letters of recommendation sent to this address. Review of applications will begin October 1 and continue until the position is filled.

Colgate University is an equal opportunity/affirmative action employer.

Posted 08/19/08

Post-doctoral Fellowship
The University of Coimbra

enior post-doctoral research associate in computational biology (Center for Neuroscience and Cell Biology, The University of Coimbra)

Applicants should forward, no later than September 10, 2008, a cover letter detailing motivation, training, work experience and future plans, a curriculum vitae, a publications list, and three references or recommendation letters to the following address: silviacnc@gmail.com". All applications must clearly indicate job reference C2008-7/2008:MSBG.

Please address any legal/formal questions about this position to silviacnc@gmail.com", and scientific questions to salvador@cnc.uc.pt.

Posted 08/19/08

Post-doc Positions
University of Auckland, New Zealand

Edmund Crampin and James Sneyd have two postdoctoral positions available at the University of Auckland, New Zealand. The project is funded by the NIH and involves the construction and study of a model of saliva secretion. The project is in collaboration with experimental groups at the University of Rochester, USA. The successful applicants will have a PhD in mathematical biology, applied mathematics, physics, biophysics, bioengineering, or some similar discipline, and will have some experience in the construction and numerical solution of deterministic models in biology. A knowledge of calcium dynamics and fluid transport will be helpful but not required.

Both positions are potentially for three years.

The University of Auckland is New Zealand's leading research university and has an international reputation in the field of mathematical physiology. Successful applicants will join an active research team that spans many areas of mathematical and computational physiology.

The weather is warm year round but it rains a lot. Still, the beaches are lovely. There are many worse places to live.

Anybody who is interested should contact James Sneyd (sneyd@math.auckland.ac.nz) or Edmund Crampin (e.crampin@auckland.ac.nz).

Posted 08/18/08

Research Scientists
Winton Capital Management

Winton Capital Management is a state-of-the-art quantitative fund management company with offices in Oxford and London.

Research
Winton is a heavily research-oriented organisation, based on the principle that superior knowledge holds the key to consistent success in the financial markets. The firm's investment decisions are made purely systematically, based on mathematical algorithms derived from sophisticated statistical analysis.

Culture
Winton was founded in 1997 and has since grown to over 150 employees with more than half that number engaged in research. Winton looks for exceptional candidates with quantitative backgrounds who would like to work in a relaxed 'university-like' atmosphere a-typical of the investment industry. The dynamic nature of Winton's business allows for fast changing career paths, which suit the needs of employees as they develop.

Opportunities
Winton is seeking scientists with a practical attitude and an interest in finance who can analyse large datasets. As a numerical analyst you will join a highly skilled team of researchers working across disciplines on topics arising from algorithmic trading. Typical projects include interpolation of volatility surfaces in high dimensions, large-scale optimization and correlation estimation. At the cutting edge of science and economics, Winton provides outstanding facilities for research, access to data and exceptional compensation packages. Advanced computer science skills are an advantage.

To apply or for more information please contact George Calderbank, on +4420 7610 5350 or by email at Recruitment@WintonCapital.com.

Posted 08/12/08

Computational Systems and Bioinformatics Scientists
EPA

EPA is seeking qualified individuals to work in a team-oriented, multi-disciplinary research organization dedicated to bringing innovation to the methods used to detect the hazards and characterize the risks of environmental stressors. These positions are in the National Center for Computational Toxicology (NCCT), located in Research Triangle Park, NC. More information on EPA's computational toxicology program is available at: http://www.epa.gov/comptox/ The NCCT provides scientific leadership, understanding and tools related to the application of mathematical and computer models to technologies derived from computational chemistry, molecular biology and systems biology in order to improve the Agency's data reporting requirements, priority setting approaches to understanding chemical toxicity, and risk assessment approaches. The major challenge of the research program is to improve the predictive capabilities of the methods, models and measurements that constitute the input materials to the computational models. Working with a team of scientists in systems biology, computational modeling and dynamic simulation, the major duties for these positions include:

Computational Systems Scientist (GS-12/13). Announcement # RTP-DE-2008-0165;
1) Develop and apply computational approaches for simulating the dynamic response of biological systems to environmental stressors and their impact on human health; 2) develop advanced computational methods, tools and resources to support the development and use of computational toxicology methods in the characterization of dose-response; 3) provide expertise to research teams on how to structure experimental projects that yield data of sufficient quality and quantity facilitating quantification of molecular and cellular changes across multiple levels of biological organization; 4) develop, validate and implement novel computational algorithms; 5) develop or utilize semantic models of complex biological processes to aid simulation.

Bioinformatics Scientist (GS-12/13). Announcement # RTP-DE-2008-0164;
1) Development and application of tools and methods for the analysis of in vitro (HTS, genomic, proteomic, metabolomic) and in vivo toxicology data derived from human health-related research; 2) knowledge discovery using bioinformatics tools and tool development for functional and project needs, including those related to extrapolation across dose levels, species, and chemicals; 3) provide expertise to research teams on how to structure experimental projects to yield data of sufficient quality and quantity to facilitate mechanistically detailed understanding of chemically-induced toxicity; 4) develop, validate and implement novel databases, computational models and algorithms and statistical data analysis approaches; 5) organize/utilize a variety of chemical and biological information.

How to Apply: The official announcement and instructions on how to apply are available at: www.usajobs.gov under the announcement numbers referenced above. All application materials must be submitted online, per the instructions, by the closing date of September 8, 2008.

These are full-time, permanent positions. U.S. citizenship is required and applicants must meet U.S. Office of Personnel Management qualification requirements including specific educational course work. The selected applicant will be eligible for full benefits including relocation expenses, health and life insurance, retirement, recruitment/signing bonus, and vacation and sick leave. For additional information, please contact: Ms. Rena Sawyer at (800) 433-9633 or via email at sawyer.rena@epa.gov

The U.S. EPA is an Equal Opportunity Employer

Posted 08/11/08

Postdoc positions
Technical University of Denmark

DIACON (Diabetes Control) is a research project that concerns development of "Control Algorithms for Semi- and Fully-Automated Pen and Pump Insulin Administration" to patients with type I diabetes. The project is funded by NABIIT - the Danish Strategic Research council. The partners in the project are DTU Informatics, DTU-Biosys, Hvidovre Hospital, and Novo Nordisk A/S. In addition we collaborate with University of California at Santa Barbara and Uppsala University.

DIACON Project
In this project we develop and test new technologies for treatment of diabetes. The objective of the project is to construct systems that can regulate and stabilize blood glucose levels in patients with type I diabetes. These systems are variations of the so-called Artificial Pancreas. The Artificial Pancreas consists of a subcutaneous glucose sensor, a control algorithm, and an insulin pump. The sensor measures glucose levels under the skin. This signal is used by the control algorithm to compute the correct amount of insulin to inject in order to keep the blood glucose at its target level. The computed amount is injected using the insulin pump. Glucose sensors and insulin pumps are already available. The project and the 3 PhD/Post Doc positions focus on development of the automatic control technology needed for the Artificial Pancreas. The topics of the 3 projects are:

Computational Systems Physiology (physiological models, simulation)
Adaptation to the Individual (System Identification)
Control Systems and Predictive Control Algorithms

The projects for the 3 positions (Post Doc) require significant collaboration. At a later stage a medical PhD will be associated to the projects in order to connect to clinical tests at Hvidovre Hospital.

You can get more information at:
http://www.dtu.dk/Om_DTU/ledige_stillinger.aspx?guid=22900096
or by contacting:
John Bagterp Jørgensen, Ph
Assistant Professor of Scientific Computing
Informatics and Mathematical Modelling
Building 305, Office 109
The Technical University of Denmark
DK-2800 Kgs. Lyngby
Denmark
Phone : +45 45253088
E-mail: jbj@imm.dtu.dk

Posted 08/11/08

Postdoc in Applied Math
University of Graz, Austria

The START-Project "Interfaces and Free Boundaries" (directed by M. Hintermueller) hosted at the Karl Franzens University of Graz (Austria) invites applications for a POST-DOC Position in Applied Mathematics.

We are looking for a young scientist holding a PhD in Applied Mathematics or Scientific Computing with specialization in at least one of the fields: large scale or PDE-constrained optimization, variational inequalities, shape or topology optimization, mathematical image processing.

The START-project is based on a scientific award by the Austrian Ministry of Education, Science and Culture administered by the Austrian Science Fund FWF. Besides applied mathematics, the START-Project also has a strong component in computational science focusing on the numerical realization of algorithms in various applications. For a more detailed description see the web page http://www.uni-graz.at/imawww/ifb/. Also, the post-doc is invited to cooperate with the special research group on "Mathematical Optimization and Applications in Biomedical Science" (http://math.uni-graz.at/mobis/). The salary follows the rules of the Austrian National Science Foundation FWF (approximately brutto EUR 42368/year).

Please send your application by email to michael.hintermueller@uni-graz.at. Your email should contain a pdf file as an attachment with the following information:

Curriculum Vitae (CV),
a short description of your qualifications and experience (publications, theses),
a letter describing concisely your scientific interests,
names and email-addresses of at least two scientists willing to provide a reference.

Ao. Univ.-Prof. Dr. Michael Hintermueller, Institute for Mathematics and Scientific Computing, University of Graz, Heinrichstr. 36, A-8010 Graz, Austria; tel.: + 43 316 380 5076, Fax: + 43 316 380 9818.

Posted 08/06/08

Two Post-doctoral Opportunities
University of Alberta, Edmonton

1. Post-doctoral position modelling spatial ecology of streams

Applications are sought from outstanding researchers for a two-year postdoctoral position modelling the spatial ecology of streams. The position involves development of mechanistic, process-oriented models for stream hydrology and biological interactions. The goal is to understand in-stream flow needs for healthy ecosystems.

Duties involve developing mathematical and computational models and relating them to field data collected from rivers and streams in Alberta. The position includes collaboration with a team of biologists, engineers, and government scientists. It will be under the supervision of Mark Lewis, Canada Research Chair in Mathematical Biology, University of Alberta.

Lewis website: www.math.ualberta.ca/~mlewis.

To apply, send a current CV and a statement of research interest to Mark Lewis via email: mlewis@math.ualberta.ca with a cc to Cecilia Hutchinson ceciliah@math.ualberta.ca.

Please include the names of two-three potential referees, but do not solicit reference letters at this stage. Review of the applications will start on August 1, 2008 and will continue until the position is filled.

2. Post-doctoral opportunity in "Mathematical Modeling of Insect Invasion Dynamics, as informed by Pathosystem Genomics Data"

Context: Insect invasions are characterized by systematic changes in population numbers over time and space as insects reproduce and disperse into new host territory. The mountain pine beetle in North America is a system where an indigenous species has recently increased its range to the point of threatening novel host species. Although the population dynamics of the natural system within its previous host range (British Columbia, W. of the Rocky Mountains) is relatively well-researched, there is tremendous uncertainty within the new host range (Alberta, E. of the Rocky Mountains) on key parameters, including beetle dispersal rates, host suitability, host vigor, and fungal pathogenicity.

A significant interdisciplinary project (THE TRIA PROJECT. Mountain Pine Beetle System Genomics) has been mounted to examine the population genetics and functional genomics of the beetle-fungus-tree interaction, in order to characterize the uncertainty surrounding key population processes affecting outbreak wave propagation eastward. The project is seeking a qualified mathematician to work with its team of scientists to develop a mathematical model of mountain pine beetle invasion biology that will use genomics-based data to inform the spread model. These data include population genetic structure data (for the beetle, fungus, and tree) and functional genomics data (genome-wide responses to environmental stresses) pertaining to critical aspects of the beetle-fungus-host interaction.

The incumbent will have a PhD in mathematics and/or biology with demonstrated experience in the development of analytical mathematical models of epidemiological processes, and a familiarity with simulation modeling approaches. A strong interest in the use of population genetics and functional genomics data is essential. Familiarity and interest in the problems of error propagation, uncertainty analysis, stochasticity, and non-stationarity in complex (i.e. nonlinear, multi-causal) systems is desirable.

The incumbent will be expected to work within a loosely defined team framework, to complement the activities of two other modeling groups (one pursing a process-oriented simulation approach, and the other a statistical approach). However there is substantial freedom to define the methods and deliverables according to the experiences, talents, and interests of the incumbent.

The incumbent will split their residence between the Northern Forestry Centre and the University of Alberta, both in Edmonton, Alberta. The position will be co-supervised by Dr. Barry Cooke (Canadian Forest Service) and Dr. Mark Lewis (Canada Research Chair in Mathematical Biology, U. Alberta).

Particulars: This position is funded until Dec 31, 2009 with a possibility of extension. Interested individuals should submit an application package (cover letter and curriculum vitae) and arrange to have three sealed letters of reference forwarded to the address below. Electronic applications are preferred. Salary is commensurate with experience.

Matt Bryman
Project Manager - THE TRIA PROJECT. Mountain Pine Beetle System Genomics
CW 420 Biological Sciences Building
University of Alberta
Edmonton, AB, Canada
T6G 2E9
mbryman@ualberta.ca

Informal enquiries are encouraged and should be addressed to either Dr. Cooke (bcooke@NRCan.gc.ca) or Dr. Lewis (mlewis@math.ualberta.ca)

Posted 08/06/08

Postdoctoral Positions: Systems Biology
University of Luxembourg

Post Doc in Systems Biology / Life Sciences (3-years contract, renewable, starting October 2008 or later)

Within systems biology detailed mathematical (ODE) models based on molecular interactions are widely used to analyze mammalian signalling networks. Global sensitivity methods (variance based) shall be implemented and applied to analyze the pro- and anti-apoptotic signalling in mammalian cells. This will help to identify the hub proteins within this network which will be promising targets for pharmaceutical strategies.

For further information, please contact:
Thomas Sauter
University of Luxembourg
Tel: +49 711 6856 6611
Email: mailto:thomas.sauter@uni.lu
Url :

Interested candidates are asked to send their full application (letter of motivation, detailed CV, copies of diploma, photo) until September 30th, 2008 by e-mail to mailto:thomas.sauter@uni.lu.

Posted 08/06/08

Postdoctoral Positions: BioDynamics
Boston University

Postdoctoral positions are available for "BioDynamics at Boston University", a Research and Training Grant funded by the NSF.

The RTG group is associated with the Center for BioDynamics (CBD). The senior faculty members of this group are from Mathematics (U. Eden, E. Kolaczyk, N. Kopell (PI), T. Kaper, C. E. Wayne) and Biomedical Engineering (J. Collins, D. Segre, K. Sen). Research themes of the RTG focus on analysis of systems with multiple time-scales, applications of dynamical systems to neuroscience, and applications of dynamical systems to genetic regulatory networks.

For information about collaborative activities of this group, please see cbd.bu.edu. Postdoctoral applications should be sent to: Joan Butler, Center for BioDynamics, 111 Cummington Street, Boston University, Boston MA 02215. Please include a CV and a cover letter stating the reasons you are appropriate for this group. Also have 3 letters of recommendation sent to the CBD. Applications will be reviewed starting from Dec. 1, 2008.

Applicants must be US citizens or resident aliens. Successful Postdoctoral candidates will teach one course per semester, including opportunities to design and/or teach new interdisciplinary curricula. For further possible positions associated with the CBD, please see http:/www.cbd.bu.edu.

Posted 08/04/08

Postdoctoral position
University of Cambridge

postdoctoral research associate position is available starting October 1st at the Department of Engineering in Cambridge. The successful candidate will work on a project on parallel numerical methods for fluid-structure interaction with application to life sciences.

The candidate should have a PhD in Computational Mechanics, Applied Mathematics or a closely related field. Strong background in nonlinear mechanics, finite elements, C/C++ software development and high performance computing are expected. Although not required, experience in biological fluid dynamics, computational geometry and domain decomposition methods are desirable. The position is for up to three years.

To apply, please email a cv, one or two representative publications and the names of two references to Dr. Fehmi Cirak (mailto:fc286@cam.ac.uk).

http://www-g.eng.cam.ac.uk/csml/

Posted 08/04/08

Postdoc opening
Indiana University-Purdue University Indianapolis

The Department of Mathematical Sciences and the Center for Mathematical Biosciences at the Indiana University-Purdue University Indianapolis (IUPUI) invite applications for a one-year postdoctoral position in the area of applied and computational mathematical science. This position may be renewed for an additional year based upon the availability of funds. Starting date is negotiable.

Applicants should have a Ph.D in Mathematics, Mechanical Engineering, Computer Science, or other related fields. The candidates are expected to have fluid mechanics knowledge at the graduate level and working experience in scientific computing. The postdoctoral fellow will participate an ongoing NSF funded project of developing an immersed boundary method and its applications in biofluid mechanics.

IUPUI is a young large urban research university that has been growing rapidly. The Center for Mathematical Biosciences and the School of Medicine on the IUPUI campus provide an excellent environment for collaborative research in many areas of quantitative biosciences such as biofluid mechanics. We are located in the downtown of Indianapolis, the 12th largest city in USA, which offers the lower-than-average cost of living and one of the most affordable housing markets in the USA.

If interested, please send your current CV including a list of publications, research statement, and contact information for three references to Dr. Luoding Zhu via e-mail: lzhu@math.iupui.edu, or by regular mail to: 402 N. Blackford Street, LD 270, Indianapolis, IN 46202.

IUPUI is an EEO/AA Employer, M/F/D.

Posted 07/30/08

Assistant Professorships & Research Assistant Professorships
University of Michigan

Description:
These positions for up to three years are designed to provide mathematicians with favorable circumstances for academic career development in research and teaching. Assistant Professorships have a teaching responsibility of two courses per semester; T.H. Hildebrandt positions have a responsibility of one course per semester. These positions may be combined with other postdoctoral fellowships and grant funding, giving additional reductions in teaching responsibility.

Eligibility:
Preference is given to candidates who receive the Ph.D. degree in 2007 or later and who submit a completed application by December 15, 2008.

Salary amount:
Salary is competitive and there are opportunities for supplemental summer salary.

Application information:
For information, application and a list of current tenured mathematics faculty, visit http://www.math.lsa.umich.edu/information/postdoc_positions.shtml. This form may also be obtained by e-mail from math-postdoc-search@umich.edu; or by mail to: Hiring Committee, Department of Mathematics, University of Michigan, 2074 East Hall, 530 Church, Ann Arbor, MI 48109-1043. The preferred method is applying at the AMS website: http://www.ams.org/employment (math jobs). Please provide evidence of teaching excellence. The University of Michigan is an equal opportunity, affirmative action employer. Women and minorities are encouraged to apply. The University is responsive to the needs of dual career couples.

Posted 07/30/08

Postdoctoral Position
Harvard University

POSTDOCTORAL POSITION
Program for Evolutionary Dynamics
Harvard University
Website: http://www.ped.fas.harvard.edu

The Program for Evolutionary Dynamics at Harvard University is seeking a computational scientist to develop tools for analyzing problems in evolutionary biology. The ideal candidate will have a strong background in stochastic processes and be an excellent programmer. The opening is a position for a postdoctoral fellow.

Interested candidates should send a research statement, current curriculum vitae, and three letters of reference to Jordan Bice by email at bice@fas.harvard.edu or to the following address:

Jordan Bice
Program for Evolutionary Dynamics
Harvard University
1 Brattle Square, Suite 6
Cambridge, MA 02138-3758

We strongly encourage applications from female and other underrepresented minority candidates. Harvard University is an Equal Opportunity Affirmative Action Employer. Employment is contingent upon eligibility to work in the United States.

Posted 07/30/08

Postdoctoral Position: Mathematical Biology
Indiana University-Purdue University Indianapolis

The IUPUI Department of Mathematical Sciences and the Center for Mathematical Biosciences invite applications for a one-year postdoctoral position in mathematical and computational biology, beginning September 1, 2008 (or later). This position may be renewed for an additional year based upon the availability of funds. We are located in Indianapolis on the IUPUI Health Sciences campus, the focal point of the Indiana Life Sciences Initiative, which provides an excellent environment for collaborative research in many areas of quantitative biosciences.

The postdoctoral fellow will participate in an ongoing project on the exploration of dynamical properties and signal processing performed by the brain. The project has strong mathematical and biological components, offering interaction with experimental collaborators. Please visit www.math.iupui.edu/~alexey/research.html for more information.

Applicants should have a Ph.D in Mathematics, Physics, or a related field, as well as a background in Dynamical Systems and programming experience. Working knowledge in Computational Neuroscience is also desired.

To apply, please send your CV, list of publications, research statement, and contact information for three references to Prof. Alexey Kuznetsov via e-mail: akuznetsov at math dot iupui dot edu, or by regular mail: 402 N. Blackford Street, LD 270, Indianapolis, IN 46202. IUPUI is an EEO/AA Employer, M/F/D.

Posted 07/30/08

Postdoc Position in Computational Systems Biology
Texas A & M HSC College of Medicine

To see description of the job please click here.

Posted 07/17/08

Two Postdoc Positions
European Network of Excellence

Directeur GDR Stic Sante CNRS n 2647-Inserm http://stic-sante.org

A Postdoctoral Position is immediately available in the Virtual Physiological Human Network of Excellence (VPH-NoE) (a European Union FP7 project), for the SAPHIR Exemplar Project. The position involves adaptation of VPH Toolkit techniques to an existing multi-organ mathematical model (see http://saphir.ibisc.fr/) of blood pressure regulation and fluids balance (funded by the French ANR (National Research Agency)). In particular, this job involves a variety of physiological modeling techniques and ICT tools for sharing and cooperative development with a patient-specific clinical endpoint. Models and parameter data will be curated in appropriate databases. Our laboratory uses a multidisciplinary environment for multi-scale modeling in physiology, including markup languages (such as CellML), physiological parameter databases, and ontology development. Candidates must have a degree in biomedical engineering or a Ph.D. in one of the relevant fields. The host laboratory is part of the Evry Genopole, near Paris, and the job also involves substantial travel for collaboration with laboratories in England and other EU countries. Applicants should submit a curriculum vitae, a description of research interests, and a list of three people willing to write letters of reference to S. Randall Thomas Ph.D., IBISC CNRS FRE 3190, Tour Evry 2, 91000 Evry, France; email: http://saphir.ibisc.fr/, website: http://physiome.ibisc.fr/~srt/

Posted 07/17/08

Post-doctoral Position: Ecological Modeling
UC Santa Barbara

We seek a postdoc to work on models characterizing the effects of individual and/or spatial heterogeneity on population dynamics. The specific project opportunities will depend on the interests and experience of the applicant, but include: relating individual heterogeneity in demographic rates to population-level consequences such as extinction risk and invasion speed; understanding how heterogeneity and stochasticity in individual growth rates can influence population growth rates; understanding how spatial heterogeneity in the environment can lead to individual heterogeneity in demography and growth. The modeling approaches range from strategic models of generalized organisms to more specialized models that represent plants, aquatic invertebrates, fish, or terrestrial vertebrates. The primary advisors will be Bruce Kendall and Roger Nisbet; the postdoc will also interact with an interdisciplinary team that is using a restored reach of the Merced River in California as an "outdoor laboratory" to study the hydrology and ecology of rivers (ecological leads on this project are Brad Cardinale and Hunter Lenihan).

Applicants should possess a PhD in applied mathematics, mathematical or theoretical biology, systems biology, or some related discipline. The ideal candidate will have strong background in the construction and analysis of discrete- or continuous-time dynamical models, and should have experience or training in working with stochastic and/or spatial processes.

Funding is available for two years, with salary contingent on experience. Applicants should submit a CV, a statement of research interests, and the names of three referees to nisbet@lifesci.ucsb.edu. Initial review of applications will begin on 4 August 2008, but applications received after that date may be considered. The University of California is an Equal Opportunity/Affirmative Action Employer.

Posted 07/17/08

Post-doctoral Fellowship: Molecular Systems Biology
The University of Coimbra

The Process Systems Engineering Group at the Chemical Engineering Department and the Molecular Systems Biology Group at the Center for Neuroscience and Cell Biology (The University of Coimbra) are actively seeking a post-doctoral candidate to apply for an FCT-Portugal fellowship. Candidates must hold a Ph.D. diploma in engineering, physics or applied mathematics and have a keen interest on biological systems. Previous working experience in the analysis of biochemical networks and post-doctoral activities in computational biology are strong preferential conditions.

The successful applicant will contribute to a theoretic/computational analysis of the structure of metabolic networks in relation to organism physiology [see Alves, Antunes & Salvador (2006) Nature Biotechnol. 24:667-672; Salvador & Savageau (2006) Proc. Natl. Acad. Sci. USA 103:2226-2231; Salvador & Savageau (2003) Proc. Natl. Acad. Sci. USA 100:14463-14468]. The research activities will be conducted in collaboration with the systems group at the Chemical Engineering Department of the Massachusetts Institute of Technology.

The fellowship is yearly renewable for up to three years, with a salary of about 18000 Euro/year (after taxes). For further information, please contact salvador@cnc.uc.pt. Applicants should send, no later than August 14, 2008, a motivation letter, three recommendation letters, a CV and a publications list by email (salvador@cnc.uc.pt).

Posted 07/17/08

Postdoc Position: Math Design
University of Texas

POSTDOCTORAL POSITION: MATHEMATICAL DESIGN OF CANADIAN AND AMERICAN INFLUENZA INTERVENTION STRATEGIES

One postdoctoral position in biostatistics and mathematical modeling is currently available to be spent jointly at the Section of Integrative Biology at the University of Texas at Austin and the British Columbia Centre for Disease Control (BCCDC) in Vancouver, BC. This position is supported by a grant from the Canadian Institutes of Health Research (CIHR).

Open: until August 2008

Length: anticipated for two years (one year at the University of Texas at Austin followed by one year at the BCCDC)

Contacts:
Lauren Ancel Meyers
Section of Integrative Biology
University of Texas at Austin
1 University Station C0930
Austin, TX 78712
Ph: 512-471-4950, Fax: 512-471-3878
URL: http://cluster3.biosci.utexas.edu/research/meyers/
Email: laurenmeyers@mail.utexas.edu

Babak Pourbohloul, BCCDC, Babak.Pourbohloul@bccdc.ca

Location: University of Texas at Austin in Austin, Texas; British Columbia Centre for Disease Control in Vancouver, BC.

Project: Evaluation of Ontario's Universal Influenza Immunization Program

In July 2000, Ontario initiated the world's first large-scale universal influenza immunization program (UIIP) to provide free influenza vaccines for the entire population aged 6 months or older. We aim to evaluate Ontariols UIIP in relation to targeted influenza immunization programs (TIIP) that exist in other provinces in Canada.

This proposal combines six components using a variety of approaches to address several objectives. The postdoctoral researcher will be involved in the mathematical modeling and data analysis component which aims to: a) to build demographic-specific contact network models for the cities of Toronto, Vancouver and Halifax, b) to estimate transmissibility of different influenza strains using morbidity data in conjunction with the network models constructed for each city; c) to compare currently-used urban vaccination strategies assuming various degrees of vaccine efficacy, coverage, and cross-immunity for each city; and d) to determine the coverage necessary for each strategy to achieve herd immunity for the population as a whole as well as the most vulnerable segments of the population.

Job description: The postdoctoral researcher will be involved in multiple aspects of the project, in collaboration with epidemiologists, infectious disease specialists, public health officials, mathematical modelers and statisticians from the University of Texas at Austin, the British Columbia Centre for Disease Control and several other Canadian public health and medical institutions. He/she will contribute to the analysis of epidemiological data, the development of new mathematical modeling, and the application of statistics and modeling to evaluating and designing optimal influenza intervention plans. The postdoctoral researcher will be expected to prepare and publish research papers in the peer-reviewed literature. He/she will be based at both the University of Texas at Austin and the British Columbia Centre for Disease Control in Vancouver, BC; ideally the person will spend one year in Austin followed by one year in Vancouver, with occasional visits to the other site. This position is for two years, with a starting date between September and December 2008.

Educational qualifications: A PhD in one of the following areas is required: biostatistics, epidemiology, demography, statistics, mathematics, physics or a related quantitative discipline. Prior research experience in the one or more of the following areas is desirable: epidemiology of infectious diseases, mathematical modeling, and statistical analysis of complex data.

Other requirements: We are seeking applicants who are able to work independently and as part of a multidisciplinary research team, and have the flexibility to travel between research sites.

Salary: The salary will be approximately US$45,000 to US$60,000 per annum, commensurate with training and experience. Full benefits will be included, and funds to support position-related travel.

To apply: Please contact Lauren Ancel Meyers (laurenmeyers@mail.utexas.edu) and Babak Pourbohloul (Babak.Pourbohloul@bccdc.ca) to inquire about or apply for the position. To apply, please submit a CV, a brief statement describing your interest in the position and relevant qualifications and at least three letters of reference.

More information: For more information about the Meyers group and the Section of Integrative Biology at the University of Texas at Austin, please visit:

http://cluster3.biosci.utexas.edu/research/meyers/
http://www.biosci.utexas.edu/IB/

For more information about the Division of Mathematical Modeling at the British Columbia Centre for Disease Control, please visit:

http://www.mathmodeling.cdc.ubc.ca/

Posted 07/17/08

Postdoc Position: Network Models
University of Texas

The Meyers group at the University of Texas at Austin is seeking a highly motivated postdoctoral researcher for an NSF-funded project on the mathematical modeling of infectious diseases. This position can begin as early as September 2008, and is renewable annually for up to two years.

Contact:
Lauren Ancel Meyers
Section of Integrative Biology
University of Texas at Austin
1 University Station C0930
Austin, TX 78712
Ph: 512-471-4950, Fax: 512-471-3878
URL: http://cluster3.biosci.utexas.edu/research/meyers/
Email: laurenmeyers@mail.utexas.edu

Project description: Contact network epidemiology is a new and powerful mathematical approach to studying the ecology of infectious diseases. It involves first building realistic network models of the complex host interaction patterns that underlie parasite transmission and then applying methods from statistical physics to predict the spread of parasites. These methods allow one to develop explicit models of complex host population structures that can be solved mathematically without resorting to intensive computer simulations. This project extends this approach to gain new insight into host-parasite dynamics, and aims to: (1) develop new mathematical methods for modeling modular host population structures and (2) apply them to understanding the spread of diseases in wildlife populations.

This work will lead to greater methodological versatility and new perspectives on the relationship between host community structure and disease dynamics. Specifically, this project focuses on the ecology and evolution of animal pathogens in multi-host systems, a topic of great importance to the health of humans, domestic animals, and wildlife populations of conservation concern.

Job description: The postdoctoral researcher will be involved in multiple aspects of the project, in collaboration with wildlife ecologists, evolutionary biologists, and mathematical modelers from the University of Texas at Austin and collaborating institutions. He/she will contribute to the analysis of ecological and molecular data from hosts and their pathogens, the development of new mathematical models, and the application of statistics and modeling to basic and applied questions about the spread and evolution of diseases in complex host populations. The postdoctoral researcher will be expected to prepare and publish research papers in the peer-reviewed literature. He/she will be based at the University of Texas at Austin. This position is renewable annually for up to two years, with a starting date between September and December 2008.

Educational qualifications: A PhD in one of the following areas is required: biostatistics, ecology, evolutionary biology, infectious disease epidemiology, statistics, mathematics, physics or a related quantitative discipline. Prior research experience in statistics and/or mathematical modeling is desirable.

Salary: The salary will be approximately $40,000 to $45,000 per annum, commensurate with training and experience. Full benefits will be included as well as funds to support travel to meetings.

To apply: Please contact Lauren Ancel Meyers (laurenmeyers@mail.utexas.edu) to inquire about or apply for the position. To apply, please submit a CV, a brief statement describing your interest in the position and relevant qualifications, and three letters of reference.

Posted 07/17/08

Postdoctoral Position: Theoretical/Mathematical Ecology
University of Stellenbosch

Mathematical models and simulations play a crucial role in advancing the science of ecology. From the promising foundation built in the early 20th century and the golden age of the 60s, ecology has entered a new phase. The eyes of ecologists have opened through the accumulation of field data and the progress in data analysis technique. We are facing a group of questions that are difficult to put down using elegant mathematics; rather numerical simulation and modelling have become a more dominant way of doing research. Furthermore, our focus has shifted from classic species interactions to large-scale, long-term patterns of ecological systems. From the niche-neutral community debate to the debate on the relationship between the number of invasive species and the species richness in recipient communities, an urgent issue for mathematical/theoretical ecologists is to set up a mathematical theory (model) of ecological communities. The central target of this postdoctoral fellow is to build a mathematical model (or a group of theories) of ecological communities that can provide explanations for community (macroecological) structures and patterns.

Unified, mathematical model of ecological communities
Scaling theory of species distribution and diversity in communities
RResponses of ecological communities to disturbances (such as land transformation, biological invasions and climatic changes)
Applications of nonlinear theory (e.g. fractal, chaos, self-organization, catastrophe, maximum entropy, etc.) to understanding community/macroecological patterns

Three questions regarding the biological invasion are also among the applications of the model:

Localization and time lag in biological invasion
Dispersal mechanisms of invasive species: diffusion and long-distance jumps
The changes of structure and dynamics of recipient communities

The post-doc will work with Dr. Cang Hui to tackle these questions. Collaboration with other colleagues is also strongly recommended. Candidates with a strong mathematical/theoretical ecology background are preferred, and a good understanding of ecological systems (e.g. macroecology, spatial ecology, population genetics, invasion biology, etc.) is also necessary. The candidates should send a two page project description with a list of specific research questions, accompanied by a detail CV, two/three publication reprints and the contact details of two references by email to Dr. Cang Hui (chui@sun.ac.za). The starting time of this position can be negotiated but the end of 2008 would be preferred. This position will remain open until an appropriate candidate is selected. An amount of R150 000 annual fellowship will be awarded to the candidate for the first year with an option to renew.

Detailed information about the DST-NRF Centre of Excellence for Invasion Biology, University of Stellenbosch can be found on the website http://academic.sun.ac.za/cib/

Posted 07/17/08

NIH Postdoctoral Fellowship
National Institutes of Health

IH Postdoctoral Fellowship: Mathematical Modeling of Human Metabolism and Body Weight Regulation.

A postdoctoral fellowship is available in the Laboratory of Biological Modeling at the National Institute of Diabetes & Digestive & Kidney Diseases, one of the National Institutes of Health located in Bethesda, Maryland. The successful candidate will develop mathematical models of human metabolism and body weight regulation in collaboration with experimental physiologists. Specific projects include, but are not limited to:

Adaptations of human metabolism to dietary manipulations
Regulation of body weight and composition
Effects of exercise on human metabolism and body composition
Effects of aging on metabolism and body composition

Applicants should possess a Ph.D. degree in Applied Mathematics, Engineering, Physics, Biochemistry, Physiology, Nutrition, or a related field. The successful candidate will have strong quantitative and mathematical abilities and an interest in studying the regulation of metabolism in humans. Salary will be commensurate with experience according to NIH guidelines.

Please send your CV and a list of 3 references to:

Kevin Hall, Ph. D.
Laboratory of Biological Modeling
National Institute of Diabetes & Digestive & Kidney Diseases
National Institutes of Health
12A South Drive, Room 4007
Bethesda, MD 20892-5621
Email: kevinh@niddk.nih.gov

The NIH is dedicated to building a diverse community in its training and employment programs.

Posted 07/17/08

Math Sciences Postdoc Research Fellowships
NSF

Mathematical Sciences Postdoctoral Research Fellowships (MSPRF). Please see http://www.nsf.gov/funding/pgm_summ.jsp?pims_id=5301 for details.

Deadline for proposals: October 15, 2008

The purpose of the Mathematical Sciences Postdoctoral Research Fellowships (MSPRF) is to support future leaders in the mathematical sciences by enabling them to participate in research environments that will have maximal impact on their future scientific development. There will be two options for awardees: Research Fellowship and Research Instructorship. Awards will be made for appropriate research in areas of the mathematical sciences, including applications to other disciplines.

Applicants must be: U.S. citizens, nationals, or legally admitted permanent resident aliens; may not have held the doctoral degree more than two years as of January 1 of the year of the award; must propose research in the mathematical sciences; may not have previously received a Federal research grant; and may not submit a research plan duplicated in another NSF proposal. Eligibility is restricted to individuals who have not previously been offered an award by the MSPRF program.

Posted 07/16/08

Medical Director of Clinical Information Systems
Baylor Hospital and Clinic

To see the job description and requirements please click here.

Posted 07/15/08

Postdoctoral Research Assistant
Polytechnic University of Valencia

The cardiac modelling research group currently needs a postdoctoral research assistant. To see the job description and requirements please click here.

Posted 06/30/08

Research Professor Positions
KAIST, South Korea

Research professor positions at KAIST, South Korea, one or possibly two, are available in the area of PDE based methods for image processing and/or medical imaging, especially on denoising, segmentation, registration and/or parallel computing, but not limited only to these fields.

Appointments are in the Department of Mathematical Sciences and funded by Korea Science and Engineering Foundation. Initially the appointment are for three years and renewable for additional two years. The annual salary will be commensurable to the qualification of the successful applicant. Research grant will be provided.

Applications will be accepted until August 10, 2008 and hiring decision will be made by the end of November 2008. A successful candidate could start at any time during December 2008-September 2009.

Interested applicants should contact Prof. Chang-Ock Lee (colee@kaist.edu), Department of Mathematical Sciences, KAIST.

Posted 06/30/08

Multiple positions
North Carolina State University

The Mathematics Department at North Carolina State University invites applications for up to three tenure-track, rank-open, positions beginning Fall 2009. We seek individuals whose research focuses on interdisciplinary mathematics. Two focus areas are applications to energy and the environment. Candidates must have a Ph.D. in the mathematical sciences, a record of successful postdoctoral experience, experience in interdisciplinary research, and a commitment to effective teaching at the undergraduate and graduate levels. Senior-level applicants must demonstrate a strong record of grant support and advising of Ph.D. students. The Department of Mathematics has strong research programs in both applied and pure mathematics. Many members of the department lead interdisciplinary research programs at both the local and national levels. More information about the department can be found at http://www.math.ncsu.edu.

To submit your application materials, go to www.mathjobs.org/jobs/ncsu. Include a vita, at least three letters of recommendation, and a description of current and planned research. You will then be given instructions to go to http://jobs.ncsu.edu/applicants/Central?quickFind=81073 and complete a Faculty Profile for the position. Write to math-jobs@math.ncsu.edu for questions concerning this position.

NC State University is an Equal Opportunity and Affirmative Action Employer. In addition, NC State welcomes all persons without regard to sexual orientation. The College of Physical and Mathematical Sciences welcomes the opportunity to work with candidates to identify suitable employment opportunities for spouses or partners. Review of applications will begin on December 1, 2008.

Posted 06/27/08

Post-doctoral Fellow: Computational Biologist
Hamilton, Ontario

We are seeking a computational biologist to work on theoretical methods for analyzing metagenomic data, and exploring the 'space' in which genomes evolve. The successful candidate will pursue collaborative research with Dr. Jonathan Dushoff, and collaborators at Georgia Tech, Princeton University, and UC Davis, and will be expected to take an active role in shaping the direction of this research.

We are looking for a candidate with a solid grounding in biology, as well as computational and mathematical skills. The candidate will be expected to help develop, and to apply, novel statistical and mathematical methods to understanding genomic data. The position will be based in the Disease Modeling lab at the Department of Biology, where we are currently developing a state-of-the-art computer platform for collaborative multi-scale modeling. Our lab also has access to the high-performance Sharcnet computer cluster.

Hamilton, Ontario is a pleasant place to live and work, less than an hour from both the Niagara gorge and from Toronto (and convenient to the latter by public transportation). The McMaster campus is large and green; conveniently accessible by city buses; within walking distance of pleasant residential neighborhoods; and adjacent to the Cootes Paradise section of the Royal Botanical Gardens.

The position is expected to last for two years. Review of applications will begin on 1 July 2008. Anticipated starting date is 1 Oct 2008, and is negotiable. To apply, please send (by email, in PDF format, to the address below): (1) a CV; (2) a list of three scientists who can be contacted for letters of reference; (3) a one-page statement of research interests; and (4) a half-page summary of skills and experience relevant to the pursuit of computational biology.

Posted 06/27/08

Post-doc in theoretical ecology
ENS Paris

Post-doc in theoretical ecology at ENS Paris (CERES-ERTI, Ecology & Evolution Lab UMR 7625)

Physiologically structured population models for viability analysis

Second call with new submission deadline: 1 September 2008

Applications are invited for a one-year postdoctoral position funded by R2DS (http://www.r2ds.centre-cired.fr/) to investigate the dynamics of small populations with plastic life histories, using physiologically structured population models.

Project description:
Population persistence is notably conditioned by the degree of individual variation in reproductive success, which depends on variation in any part of the life cycle. Yet, the majority of studies that examined population extinction have tended to ignore life history variation and plasticity. Here, we wish to use life history models to inform the dynamics of small populations and ask how plasticity in life history traits influences extinction dynamics. Many aspects of life history can interact with population dynamics and the project concentrates on three of them, namely growth, maturation and survival. The post-doc will explore this issue by developing models that account for variation in life history traits using the theory of physiologically structured populations (PSP). This theory takes into account that physiological development (e.g. growth, maturation) depends on the current state of the environment (e.g., temperature, food and predator densities). In turn, the influence of the population on the environment closes a feedback loop between environment, population and life history. The theory of PSP models is thus particularly well-suited to study the interaction between population dynamics and plastic life history. Small populations are subject to stochastic fluctuation in abundance. The project aims to study the feedback of this variability on life history and the consequences for extinction dynamics. The models will be parameterized with estimates from field and experimental studies undertaken with the common lizard, a species with strong thermal and food plasticity in life history traits.

The post-doc will be based at the Ecology & Evolution Lab (CNRS, UMR 7625) at the Ecole Normale Supérieure (CERES-ERTI) in Paris, where the applicant will work with David Claessen and Jean-François Le Galliard. This post-doc project is part of a research network on the dynamics of small populations funded by ANR from 2008 to 2012 and will therefore interact with a larger group of researchers. The post can start on October 1st or November 1st 2008 and will run for one year with a possible one year extension by applying to extended funding from the R2DS network in spring 2009. Gross salary will be 2500 EUR per month. The starting date can be postponed in exceptional circumstances.

Candidate profile:
There are no nationality restrictions and the successful candidate will:

Possess a doctoral degree in ecology and/or mathematics, dating no more than 2 years before 1 October 2008, though the last condition may be negotiated in exceptional circumstances.
Not have worked in the hosting lab, nor have prepared his thesis within the hosting lab, except for a return after a period of absence of at least one year.
Have strong competence in modeling, with an interest in population dynamics, viability analyses and conservation biology and knowledge of C programming or closely related languages.
Personal qualities needed for group work and inter-disciplinary study

Contact:
Application: Chantal Cuisinier,
tel.: +33 1 44 27 36 89, email: Chantal.Cuisinier@snv.jussieu.fr,
postal address:
CNRS UMR 7625,
Université Paris 6,
7 Quai St Bernard, 75005 Paris

Research project: David Claessen,
tel.: +33 1 44 32 27 21, email: david.claessen@ens.fr

How to apply:

Applicants have until September 1 2008 to send a completed application form available below to the Application contact point.
The lab director and a local jury will select one candidate from the application forms and contact the candidates from September 31 2008.
The regional office of the CNRS will be responsible for drawing up the contract.

Download a pdf version of the Application form from http://www.environnement.ens.fr/postdoc.html

Posted 06/27/08

Postdoc Positions
University of Alberta

New postdoctoral positions at the University of Alberta:
Postdoctoral position modelling spatial ecology of streams.
Postdoctoral position modelling mountain pine beetle.

Full details of the positions are available at the home page of Mark Lewis (www.math.ualberta.ca/~mlewis).

Posted 06/23/08

research/lecturing award in bioinformatics
University of Iceland

The Fulbright Scholar Program is offering a combined research/lecturing award in bioinformatics at the Faculty of Science and Faculty of Medicine, University of Iceland, Reykjavik for 2009-10. Grantees will teach undergraduate courses in gene sequences and possibly graduate courses in comparative genomics and gene expression analysis. They will also have access to all available facilities for their own research and ample time to collaborate with faculty and local scientists. The basic eligibility requirement is a Ph.D and university teaching experience. A full award description can be found at http://www.cies.org/award_book/award2009/award/Bio9268.htm. For more information and the online application, please visit http://www.cies.org or contact Muriel Joffe (mjoffe@cies.iie.org). The application deadline is August 1, 2008.

Posted 06/23/08

Newton International Fellowships

The British Academy among other research councils in the UK have just announced the launch of the Newton International Fellowship scheme. Here is what the British Academy website says about them:

A new multi-million pound initiative to fund research collaborations and improve links between UK and overseas researchers was launched by the Science Minister Ian Pearson on 4 June. The Newton International Fellowships will be overseen by the British Academy, the Royal Academy of Engineering and the Royal Society and aim to attract the most promising post-doctoral researchers working overseas in the fields of humanities, engineering, natural and social sciences.

The Fellowships will offer researchers funding to work for two years with a UK research institution, thus establishing long term international collaborations. The funding will be distributed in the form of 50 research fellowships, awarded annually, each providing support of up to £100,000 for a two year placement.

If you are interested in learning more about the scheme, please go to:
www.newtonfellowships.org

The Centre for the Study of Cultural Forms of Modern European Politics at the University of Manchester would be glad to host promising post-doctoral researchers working in the fields of the history of historiography, historical theory, cultural and social history and European politics. Interested persons should in the first instance email me under Stefan.berger@manchester.ac.uk for an informal discussion.

Stefan Berger
Professor of Modern German and Comparative European History
Director, Manchester Jean-Monnet-Centre of Excellence
Co-Director, The Centre for the Study of Cultural Forms of Modern European Politics
The University of Manchester
http://www.llc.manchester.ac.uk/aboutus/staff/german/StefanBerger/
http://www.arts.manchester.ac.uk/cultmep/currentprojects/
http://www.socialsciences.manchester.ac.uk/jeanmonnet/

Posted 06/23/08

Postdoctoral Position: Spatial Modeling
University of Guelph

Postdoctoral Position in Spatial Modeling of Vegetation Dynamics

Global Ecological Change Laboratory

Department of Environmental Biology, University of Guelph

Posted: June 17, 2008

Applications are invited for a 1-year PDF position (with possibility of renewal) in spatial modeling of vegetation dynamics. The candidate should have experience in computer programming (any platform) of spatial simulation models (any area of application) and an interest in vegetation ecology. The candidate will work with research group of Dr. Madhur Anand, Canada Research Chair in Global Ecological Change, and with one of several vegetation ecosystems under study by the group through collaborations (e.g., in Canada, Brazil, China).

Possible research questions include but are not limited to: What maintains biodiversity? What is the effect of species invasions? What are the implications of climate change? What is the role of spatial structure? What is the best way to restore a forest?

Applications will be considered immediately. Please send a CV with statement of suitability for the position and names of 2 potential referees to: Dr. Madhur Anand (manand@uoguelph.ca).

Posted 06/23/08

Postdoc Position: Spatial Population Dynamics
Umea University, Sweden

A post-doc position (2 years) in the project "Spatial heterogeneity, functional responses and predator-prey dynamics" is available. It is widely believed that spatial heterogeneity stabilizes predator-prey interactions, but the underlying mechanisms are poorly understood. This project focuses on a previously overlooked aspect: the dynamics of the covariance between predator and prey densities. The project involves cooperation with an international group of researchers that contribute with extensive data sets on predator-prey systems. The data involve a diverse set of organisms, including insects, mites, crustaceans, polychaets and mammals. Many of the systems show cycles and complex spatial patterns, e.g., "hide and seek" dynamics.

The project is demanding but will likely yield publications in high ranked journals. A paper that provides a background is found in Am. Nat. 167:246-259. For more information about the project, go to http://www.emg.umu.se/, or contact Professor Goran Englund, at goran.englund@emg.umu.se.

To qualify for the position you should have a PhD degree or equivalent. The application can be submitted either electronically or in hard-copy form. Applicants should submit a CV, copies of degree certificates, a statement of previous research achievements and teaching merits, a publication list and reprints/copies of published work numbered according to this list, a research plan (maximum 4 pages) and a list of referees, all in two copies if the application is in hard copy form. The complete application, marked with reference number, should be sent to jobb@umu.se or to the Registrar, Umea University, SE-901 87 Umea, Sweden to arrive August 15, 2008 at the latest.

Posted 06/23/08

Post-doctoral Programme: Systems Biology
CNRS-MPG

The CNRS-MPG Post-Doctoral Programme for Systems Biology was founded by the Max-Planck-Gesellschaft and the Centre National de la Recherche Scientifique, with the common goal to increase cooperation in this new field of investigation and to encourage the mobility of young scientists engaged in the pursuit of excellence.

MPG and CNRS invite applications from outstanding young scientists who are engaged or wish to engage in research in Systems Biology. Successful applicants will have demonstrated their ability to perform excellent research. They will be expected to run their personal research project, thus laying the foundations for a successful career in science. They will be offered a high-quality post-doctoral position with an initial 2-year contract and a possible 1-year extension. In addition they will receive 20k EUR p.a. for material resources and travel expenses.

Applications should include a CV, a list of publications, copies of two publications, two letters of reference, a one-page summary of scientific achievements, a two-page research plan, and their choice of two host institutions. One of these institutions should be chosen from the MPG list, and the other from the CNRS list. One of these two institutions should be marked as "main host facility". Scientists of any nationality are welcome to apply, although German applicants are expected to designate a French main host, and vice-versa.

http://www.mpi-magdeburg.mpg.de/CNRS_MPG

The deadline for application is 10 July 2008. Suitable candidates are invited to apply to both, the MPG Division for International Relations, and the CNRS Office of European Affairs.

<Michaela.Zimmermann@gv.mpg.de, Anne-Marie.Brass@cnrs-dir.fr>

Posted 06/13/08

Postdoctoral Position: Math & Computational Immunology
Bar-Ilan University

Supervisor: Prof. Ramit Mehr
prof.ramit.mehr@gmail.com
The Mina & Everard Goodman Faculty of Life Sciences
Bar-Ilan University
Ramat-Gan 52900
ISRAEL

Phone: +972-3-531-7990
Fax: +972-3-736-2560
Email: mehrra@mail.biu.ac.il, prof.ramit.mehr@gmail.com
Web: http://repertoire.os.biu.ac.il

Description: The Computational Immunology (CIL) in Bar-Ilan University is seeking a recent PhD graduate for a post-doctoral position in the field of Mathematical and Computational Immunology. This is an emerging field bridging theoretical and applied research directions in immunology, currently attracting immense interest within the research community. The position focuses on creating models of interacting populations of cells and molecules in the Immune system.

Experience requirements: The ideal candidate is expected to have at least 4 years of experience (including PhD studies) in mathematical modeling in biology, preferably in immunology; familiarity with softwares such as Matlab and at least basic programming; a substantial research experience in theoretical biology, as evidenced by a good publication record; and excellent English (reading, writing, comprehension and speaking).

Application requirements: Send CV, LP and statement of interest to: Prof. Ramit Mehr at prof.ramit.mehr@gmail.com.

Preferred means for interested applicants to contact the contact person: email.

Prof. Mehr will be present in the following meetings this summer and be able to interview potential candidates:

SMB conference July 29th-August 2nd http://www.fields.utoronto.ca/programs/scientific/CMM/08-09/SMB/index.html

SIAG-LS conference August 3rd-7th http://www.siam.org/meetings/ls08/index.php

Yale University 3rd Annual Summer School in Computational Immunology http://tsb.mssm.edu/prime/summer2008.

Posted 06/13/08

Postdoctoral Position: Infectious Disease Dynamics and Climate
University of Michigan

Postdoctoral position on infectious disease dynamics and climate
Department of Ecology and Evolutionary Biology
University of Michigan

Applications are invited for a postdoctoral position to work on the population dynamics of infectious diseases and climate variability. The research will focus on the dynamics of cholera and involve the development of mathematical models of disease and their interface with novel statistical inference methods for time series data.

The initial appointment will be for one year with the possibility of renewal.

Required expertise: Applicants should have a doctoral degree in Ecology, Epidemiology, Mathematics, Statistics, Computer Science, or a climate-related field. Experience in mathematical modelling and strong programming skills are essential. Expertise with stochastic models, time series analysis, and/or parameter estimation (such as Monte Carlo methods) is preferred. We will also consider applicants from climate related fields with expertise in forecasting and time-series modelling who are interested in applications to epidemiology.

Compensation: Salary will start at US$ 40,000.

To apply: Please submit application electronically by sending CV, letter of interest, and names of three references to Mercedes Pascual at pascual@umich.edu and Aaron King at kingaa@umich.edu.

Anticipated starting date: September 15 or later.

Posted 06/13/08

Postdoctoral Position: Computational Biology
Washington State University

Postdoctoral Positions are available in the laboratory of Dr. Ping Ye in the School of Molecular Biosciences at the Washington State University. Our laboratory utilizes computational and experimental approaches to investigate systematic behaviors of cellular responses to pathogens and environmental stimuli. We apply a two-pronged computational approach, bioinformatics data mining and mechanistic mathematical modeling. Our main experimental systems include unicellular eukaryote yeast and mammalian cell culture. For detailed information, please visit http://molecular.biosciences.wsu.edu/faculty/ye.html.

Previous experience in bioinformatics research (probabilistic graphical models and machine learning methods) or mathematical modeling (ordinary differential equations, stochastic models, and agent-based models) is required. Proficiency in programming languages, such as Perl, C, C++, R, MATLAB, is preferred. Interested applicants please a CV and contact information for three references to Dr. Ye by email pye@wsu.edu.

Posted 06/13/08

Biostatistician Position
Keygene, Rockville, MD

Keygene is an international biotechnology company with the mission to develop and apply novel enabling technologies and applications for the molecular breeding industry. The company works for leading vegetable breeders, but also has customers in universities, hospitals and in the animal breeding, fermentation and food industry. Last year, Keygene opened an US subsidiary in Rockville, Maryland, to further facilitate research collaborations and contract research in the US. To strengthen our team in Rockville we are looking for an enthusiastic, ambitious, and creative Biostatistician.

Position:
Keygene is seeking a Biostatistician, who will be working on the analysis and interpretation of large quantities of molecular and biological data to support Keygene's innovative research projects and programs. Keygene's research team works on project basis and delivers statistical services for its customers. We are looking for individuals who have excellent script developing skills and are able to efficiently use the available statistical toolboxes. The successful candidate will work closely and effectively with scientists and tool developers and will participate as a communicative team member in an interdisciplinary research team. The Biostatistician will be working under direction of the biometric group in the Netherlands. However, for US costumers you will be the direct contact person. Keygene offers an excellent and challenging work environment and competitive benefits package.

Essential qualifications of the position include:

BS in Biology and a MS in statistics, or equivalent.
Working experience in the field of Biostatistics, preferably in a business-like environment.
Broad statistical knowledge and experience with the current statistical software package R.
Familiarity with GenStat and SAS might be useful.
A plant or animal breeding background will be helpful.
Creative and proactive attitude towards teamwork and commitment.
Intrinsic motivation in the actual research question.
Excellent communication skills to interact with our costumers.
Will be able to find the right solution to their research needs.

Additional information can be obtained from An Michiels at an.michiels@keygene.com or at 2402057083. Please send an application letter and resume together with the contact information of three references to An Michiels, Director US office, Gibbs Street 155, Suite 405, Rockville, MD 20850 or by E mail to an.michiels@keygene.com. Please mention the job application title in the application letter and/or E mail subject section.

Posted 06/12/08

Postdoctoral fellow in HIV bioinformatics
University of Connecticut Health Center

We seek an individual that is highly motivated and capable of working both independently and in collaboration with others. The programmer will develop code for a website that that allows researchers to use protein sequence, interactive 3D protein structure visualization, gene ontology, short functional motifs and other sources of data to identify leads for new drug target sites for treating AIDS. Visit our laboratory website for more information (http://schiller.uchc.edu). The optimal applicant should have publications in bioinformatics or computer science journals or experience in commercial software application development. Applicants should also have experience with MySql databases, and software engineering skill for dynamic data visualization Java and web application development. Experience with Hibernate or Spring are desirable. Applications should be submitted via e-mail and include a CV, copies of relevant scientific publications, and two reference letters addressing the candidates programming skills and experience to Dr. Martin R. Schiller, Department of Molecular, Microbial, and Structural Biology, University of Connecticut Health Center, 263 Farmington Ave., Farmington, CT 06030-3305 USA. email schiller@nso.uchc.edu. The job is available June 15, 2008 or until the position is filled. The University of Connecticut is an equal opportunity employer.

Posted 06/09/08

Ph.d. / postdoc positions applied mathematics
RWTH Aachen,Germany

The Institut fuer Geometrie und Praktische Mathematik, RWTH Aachen, invites applications for two PhD / postdoc positions.

The first position is within the research project "Multiscale techniques for highly resolved vortex structures". The candidate should have some background in computational fluid dynamics, especially in conservation laws and their discretization (finite volume methods, DG methods).

The second position is within a project between the IGPM, RWTH Aachen, ETH Zurich and the chair of applied Analysis, University of Osnabruck. Good programming skills as well as a some background in function spaces and (applied and computational) harmonic analysis are a must for the candidate.

For more details see http://www.igpm.rwth-aachen.de/joboffers

Posted 06/09/08

Postdoctoral positions
University of Waterloo

Postdoctoral positions in Cancer Modelling, Dept of Applied Mathematics, University of Waterloo.

Applications are invited for one or possibly two postdoctoral positions in the Biomedical Research Group of the Department of Applied Mathematics at the University of Waterloo. The successful candidate(s) will have a PhD in Applied Mathematics, Physics, or Engineering, and expertise in the mathematical/computational modeling of tumor growth and control. The ability to interact with physicians and biologists is highly desirable.

Candidates should in the first instance send a cover letter, CV, and the names of at least three potential referees to the address below. Electronic applications are strongly recommended. Although the starting date is negotiable, the preference is for candidate(s) who can start in September/October 2008 or as soon as possible thereafter. Further details and information can be obtained from Dr. M. Kohandel (kohandel@math.uwaterloo.ca) or Dr. S. Sivaloganathan (ssivalog@math.uwaterloo.ca).

Biomedical Research Group
Department of Applied Mathematics
University of Waterloo
Waterloo, Ontario, Canada, N2L 3G1
Email: biomech@math.uwaterloo.ca
http://www.math.uwaterloo.ca/~biomech/

Posted 06/09/08

Postdoc position
Division of Applied Mathematics, Brown University

Applicants are invited to apply for a Post-Doctoral position in the scientific computing group in the Division of Applied Mathematics, Brown University. The successful candidate will work with Prof. David Gottlieb and his research associates in several funded projects in the area of high order methods for large scale high speed multi-scales multi-physics shocked flows in complex geometry. The candidate should has the background and relevant experiences in applying high order methods (such as spectral, WENO and DG with structure and unstructured grid) for large scale long time multi-scales computational fluid dynamics problem and in parallel computing with MPI and OpenMP. Candidate is also expected to be familiar with state-of-art programming techniques and languages, in particular, Fortran 90. The candidate might also involve actively in other related projects. It is important that the candidate is self-motivated and be able to perform the researches independently. The tentative starting date of the position is November 2008 and the duration of the position will be two years. The annual salary will be commensurable to the qualification of the successful applicant.

Applicants should send a copy of their CV, three letters of recommendation and, if available, sample of their relevance papers by email to Prof. Wai-Sun Don at wsdon@dam.brown.edu. Please send any inquires you might have to Prof. Wai-Sun Don via email. We will accept applications until August 31st, 2008 and hiring decision will be made shortly afterward.

Brown University is committed to Employment Equity and encourages applications from all qualified candidates, including aboriginal peoples, persons with disabilities, members of visible minorities and women.

Posted 06/09/08

Postodoc Position: CFD in Biofluid Mechanics
University of Michigan

A postodoctoral position is available immediately in the Biofluid Mechanics Research Laboratory in the Department of Biomedical Engineering at the University of Michigan. We are seeking expertise in CFD applied to fluid-elastic and fluid-interface free boundary problems. These models are related to lung airway dynamics, airway stability, liquid plug propagation and pulmonary drug delivery. The projects are funded by NIH and involve working with a diverse laboratory of fluid dynamicists, bioengineers, and medical investigators.

Qualified candidates should be proficient with the appropriate CFD techniques. Please send a CV and related publications to:
James B. Grotberg, Ph.D., M.D.
Department of Biomedical Engineering
University of Michigan
2123 Carl A. Gerstacker Building
2200 Bonisteel Boulevard Ann Arbor, MI 48109-2099

Phone: (734) 936-3834
Fax: (734) 936-1905
Email: grotberg at umich dot edu

The University of Michigan is an equal opportunity/nondiscrimination institution.

Posted 06/09/08

Postdoctoral Position in Numerical Modelling National University of Ireland, Galway

Applications are invited for a three-year fixed term contract position for a Postdoctoral Researcher in numerical modelling of the transport and diffusion of pollutants in tidal regions, starting Sept. 2008. The successful candidate will work with Dr Niall Madden, Mathematics, and Dr Michael Hartnett, Civil Engineering, to develop and implement computational techniques for solving the advection-diffusion equation. The project is funded by Science Foundation Ireland Research Frontiers Scheme.

For more details, please see http://www.maths.nuigalway.ie/vacancies/postdoc-add.shtml

Salary: Starting at Eur 40,578.

Applications: Covering letter, CV, and the names of at least two referees should be sent by email to Dr Niall Madden (Niall.Madden@NUIGalway.ie) or Dr. Michael Hartnett (Michael.Harnett@NUIGalway.ie). Informal email enquiries are welcome.

Closing date for receipt of applications is 5pm on Friday 19th July 2008.

National University of Ireland, Galway is an equal opportunity employer.

Posted 06/02/08
Permanent Position: Mathematical/Computational Biology
Oxford

PERMANENT FACULTY POSITION IN MATHEMATICAL OR COMPUTATIONAL BIOLOGY

Vacancy Reference: BK/08/31
Grade 10: The Salary will be on a scale up to 54,207 pounds
Appointment Term: Permanent
Closing date: 30 Jun 08

The Mathematical Institute and Oxford University Computing Laboratory propose to make a Permanent Faculty appointment in Mathematical or Computational Biology, with effect from 1 October 2008. The salary will be on a scale up to 54,207 pounds per annum.

The postholder will be based in the Oxford Centre for Collaborative Applied Mathematics (OCCAM), which has been established with substantial funding from the Global Research Partnership of the King Abdullah University of Science and Technology (KAUST).

The appointee will be expected to have a research record in Mathematical or Computational Biology consistent with the international standing of the University, and will play a leading role in planning and developing the research programme of OCCAM.

The appointee will be expected to have the ability to teach effectively over a wide range of mathematical topics, not exclusively in the area of his or her expertise.

Further particulars, containing details of the application procedure and of the duties, may be obtained from the Administrative Assistant (Vacancies), The Mathematical Institute, 24-29 St Giles, Oxford OX1 3LB, vacancies@maths.ox.ac.uk or by visiting http://www.maths.ox.ac.uk/notices/vacancies.

The closing date for applications is 30 Jun 08. Please quote reference number BK/08/31.

Oxford University is an Equal Opportunity Employer.

Posted 06/02/08
Future Fellowships
Commonwealth Government of Australia

The Commonwealth Government of Australia has decided to offer 1,000 four-year Future Fellowships for mid-career researchers over the next 5 years, beginning in 2009. Although the final rules are still in development, Queensland University of Technology is keen to attract outstanding candidates for these and funds will be found for appropriate interested persons to visit QUT with the aim of becoming familiar with the research in Mathematical Sciences, one of the strongest research groups in the University.

Contact: Professor Sean McElwain, Acting Head of School.
Email: s.mcelwain@qut.edu.au

Posted 06/02/08
Postdoctoral Fellowship: Quantitative Epidemiology
ASU

Postdoctoral Fellowship Opportunity in Quantitative Epidemiology

The School of Human Evolution and Social Change is currently seeking candidates for a postdoctoral fellowship in the area of parameter estimation and modeling applied to disease dynamics and public health. Candidates must hold a PhD in Applied Mathematics, Physics, Statistics, Biostatistics, or Computational Biology. Previous experience in modeling biological or social systems is highly desirable. The appointment is initially for one year, renewable for a second year contingent on satisfactory performance.

Interested applicants should send their CV, one or two relevant publications, and two reference letters to Gerardo Chowell (Arizona State University, gchowell@asu.edu).

Posted 06/02/08
Two-year Postdoc
University of Chicago

TWO YEAR POSTDOC - MODELING GYPSY MOTH POPULATION DYNAMICS with Greg Dwyer, University of Chicago

This research will extend our existing host-pathogen models to allow for realistic spatial structure and two pathogens, using data for gypsy moths to guide model development. Some experience with writing computer code is necessary, as is some familiarity with differential equations and maximum likelihood techniques, but so is at least some background in biology. More importantly, applicants should have at least one manuscript in press at the time of application. Submit a C.V., a statement of research interests, and arrange to have 3 letters of reference sent to: gdwyer@uchicago.edu Earliest start date is roughly 15 August 2008, latest start date is roughly 15 October 2008, but ask if you are interested in slightly earlier or later dates. Review of applications will begin immediately, and will continue until the position is filled. For full consideration, however, applications should be submitted no later than 16 June 2008. Salary and benefits are competitive. No ghost-docs, please.

Posted 06/02/08
Postdoctoral Position
University of Minnesota Rochester

Applications are invited for a postdoctoral position at the University of Minnesota Rochester, funded through a grant from the Howard Hughes Medical Institute. The successful candidate is expected to develop learning objects and modules in mathematics and statistics for undergraduate students in the proposed B.S. in Health Sciences degree program; participate actively in the development of the curriculum of this program; participate in integrative modules that include lower division mathematics or statistics; and participate in the development of the assessment component. The successful candidate is expected to be in residence at the University of Minnesota, Rochester and will be a member of the Center for Learning Innovation (http://www.r.umn.edu/21_CLI.htm).

The University of Minnesota Rochester (UMR) is the newest campus of the University of Minnesota system having been formally established in December 2006. The Center for Learning Innovation at UMR will take a lead in developing a learning platform for the proposed Bachelor of Science degree in the Health Sciences that is learner-centered, competency-driven, assessment-centered, and community centered. Members of this Center will work together to develop a curriculum that is integrated and promotes active learning. Applications, including a curriculum vitae, a statement of interest, and names of three references should be e-mailed directly to Dr. Claudia Neuhauser (oneuha001@umn.edu). Review of applications will begin immediately until the position is filled.

The University of Minnesota is an Equal Opportunity Employer and Educator. Women and minorities are encouraged to apply.

Posted 06/02/08
Bioinformaticist
Stemina Biomarker Discovery

Stemina Biomarker Discovery is pleased to announce an opening for a bioinformaticist effective immediately. Click here for job description.

We are seeking a senior scientist or director level bioinformaticist to add to our team with a minimum of two years post doctoral experience in bioinformatics. Experience in metabolomic data analysis is preferred, but genomic or proteomic data analysis would be acceptable. Please forward this e-mail to anyone who you think may be interested in and qualified for this position.

Interested candidates should e-mail a CV to Beth Donley at bdonley@stemina.com. Questions can also be directed to her at the e-mail address provided or by phone at 608-204-0104.

Posted 05/27/08
Professorship in quantitative biology
Vienna Biocenter

A joint search committee of the Medical University Vienna, University of Vienna, and the Veterinary University Vienna, invites applications for the position of a:
Professor in Quantitative / Systems Biology at the Vienna Biocenter

Through financial support from the WWTF (Vienna Science & Technology Fund - further details at www.wwtf.ac.at), this professorship will be established in a cooperation of major Universities in Vienna for an initial period of 5 years, with the possibility to convert into a tenured position after that. The aim is to exploit innovative approaches in mathematical modelling and systems biology to uncover fundamental principles of complex biological systems. The Professor will be expected to interact closely with experimental groups at the partner institutions, and with the Center of Integrative Bioinformatics Vienna, located at the Vienna Biocenter. Potential candidates should have a strong theoretical and mathematical background, as well as a proven track record of successful collaborations with experimental biologists. The Professor will be expected to emphasize research areas of emerging importance and use quantitative biological data to develop dynamic and predictive mathemathical models to unravel principles and fundamental properties of biological systems in research areas including (but not limited to) infection biology, RNA biology, immunology, oncology, signaling and stress response in various model systems. Interested individuals, and in particular female scientists, are strongly encouraged to send by e-mail or courier their CV (maximum three pages), a 3 page statement of future research interests and a list of up to 10 relevant publications during the past 6 years to Karl Kuchler (Chair of the Search Committee - Medical University of Vienna, Max F. Perutz Laboratories, Campus Vienna Biocenter, A-1030 Vienna, Austria) at Karl.Kuchler@meduniwien.ac.at, by the deadline of June 30, 2008.

The Max F. Perutz Laboratories - www.mfpl.ac.at - at the Vienna Biocenter are a joint venture of the University of Vienna and the Medical University of Vienna to develop and foster excellence in biomedical research in Austria.

Posted 05/27/08
Bioinformatics Positions
Silvaco International

Development Engineers Silvaco International is a market leader in TCAD/CAD software. Rapid expansion has created several exciting opportunities.

Numerical Solvers
Develop and maintain a state of the art linear solver library. Candidate must be experienced with direct and iterative methods for large sparse linear systems. Ph.D. with 5 years direct development experience of sparse linear solvers and extensive knowledge of C/C++ required.

Mesh Generation
Seeking a qualified individual to design, develop and maintain our 3D volumetric and surface mesh generators. Specific requirements will include experience in developing unstructured volumetric and surface mesh, solid modeling techniques and surface definitions, adaptive mesh refinement and de-refinement. Good knowledge of data structures and algorithm design and C++ object-oriented design techniques. Ability to assimilate code quickly and leverage new code off existing libraries. Familiar with domain decomposition, adaptive smoothing and octree techniques is a plus. Ph.D. in Math/Computer Science/Engineering or MS plus three years relevant experience.

Software Parallelization and Threading
Design, develop and improve code parallelization in a variety of leading edge simulation tools. Must have strong C, C++ skills and knowledge of SMP parallization in C, C++ code. Knowledge of direct and iterative solvers a big plus. Ph.D. in Maths/Computer Science/Computational Science or MS with three years experience.

Graph Theory and Geometry Expert
Seeking an expert in graph theory and geometry to work on leading edge semiconductor design software. Must be proficient in C++ programming using STL. Ph.D. or MS plus three years relevant experience.

We are a pre-IPO company. Please send resume to: jobs@silvaco.com

www.silvaco.com

Posted 05/23/08
Research Positions
NIH

Tenure-Track and Tenure Investigator Positions
Systems Immunology and Infectious Disease Modeling, NIAID
(deadline: May 23)

Tenure-Track Investigator
Epidemiologist, Infections & Cancer, NCI
(deadline: May 30)

Tenure-Track Investigator
Immunoepidemiologist, NCI
(deadline: May 30)

Tenure Track/Tenured Position
Basic Computational Biomedical Research, NHLBI
(deadline: May 31)

Senior Investigator, Tenure-Track Investigator, Staff Scientist
Bioinformatics/Computational Biology Biostatistics Branch, NIEHS
(deadline: open-ended)

For details see http://smb.org/publications/SMBnet/service/v08i20_NIH_Positions

Posted 05/23/08
Research Faculty Position
VMASC, Old Dominion University

Old Dominion University's Virginia Modeling, Analysis and Simulation Center (VMASC) is seeking twelve-month non-tenure track research faculty with demonstrated ability to develop and conduct a funded research program in simulation-based health care and medical research and to teach and mentor graduate students.

PhD in modeling and simulation, mechanical or biomedical engineering, mathematical biology, or related field, excellent communications skills, strong quantitative and statistical skills, and the ability to organize and lead collaborative teams, is required. Post-doctoral research experience a plus. We are especially seeking a researcher with experience applying modeling and simulation in the medical training, patient care, disease modeling, or hospital management areas. Title and salary based on qualifications and experience. Send letter of application, resume or curriculum vitae, and three professional references to:

Sheila A. Flanagan
Financial and Administrative Manager
Old Dominion University Research Foundation
Virginia Modeling, Analysis & Simulation Center (VMASC)
1030 University Blvd, Suffolk, VA 23435
SFlanaga@odu.edu

Position application review will begin June 15, 2008 and continue until the position is filled.

Posted 05/23/08
Postdoctoral research position, Mathematical Modelling
OCCAM

Vacancy Reference: BK/08/026
Grade: 7
Salary Range: 26,666-28,294 Pounds
Appointment Term: 3 years
Closing Date: 06/06/2008

Mathematical modelling of plant crop growth in stressed environments
[BK/08/26]

3 YEAR POST-DOCTORAL RESEARCH POSITION

We invite applications for a Postdoctoral research position, funded by the King Abdullah University of Science and Technology (KAUST) Global Research Partnership (GRP), to work with Dr Tiina Roose at the newly established Oxford Centre for Collaborative Applied Mathematics (OCCAM). This position is available from 1 October 2008.

OCCAM has been established with substantial funding from the KAUST GRP. The Centre, which is part of the Mathematical Institute, will be allied to a global network of mathematicians. Aiming to meet the ever-increasing global demand for quantitative understanding of complex scientific phenomena, OCCAM has been built on the strength of four pre-existing groups of applied and computational mathematicians working in Oxford: the Oxford Centre for Industrial and Applied Mathematics, the Centre for Mathematical Biology, the Numerical Analysis Group and the Computational Biology Group. It will have a symbiotic relationship with other scientific communities which have a need for problem-solving mathematics both within the University of Oxford and beyond. Over the first five years the centre will employ 40 new staff and students.

The aim of the project is to build on previous experience of modelling plant water and nutrient uptake in temperate climates to develop a model for more arid conditions where the existing models cannot be applied. We will study questions such as the identification of the optimal plant root structure for given soil conditions, and the optimal irrigation and fertilisation regime. We will also investigate how water salinity affects plant water and nutrient acquisition and how this could be managed for better plant growth. The models would also be applicable to bioremediation of soil contaminants and help decide how much pollutant hyperaccumulator plants can remove from the soil and what soil amendments would maximise the pollutant removal.

This scientific problem inherently involves different length and timescales and we will use homogenisation to derive macroscopic equations that describe the nutrient and water uptake on a field/plant scale based on the uptake mechanisms at the single root scale. This modelling will be done in close collaboration with the experimental groups [Professor Kirk (Cranfield University), Professor Jones (University of Wales, Bangor), and Professor Wissuwa (Japan International Research Centre for Agricultural Sciences)], and improved by iterative comparison against experiments so that models are validated at all different length scales. The project will involve model building, asymptotic analysis, homogenization and porous media flows.

Further particulars may be obtained from the Administrative Assistant (vacancies) at The Mathematical Institute, 24-29 St Giles, Oxford, OX1 3LB, email vacancies@maths.ox.ac.uk and from the link below. Applications including a CV, a covering letter explaining the candidate's suitability for the position and how they meet the selection criteria, and the name and address of two referees, should be sent to the Administrative Assistant (vacancies) at the above address or by email to vacancies@maths.ox.ac.uk and must arrive by lunchtime on 6 June 2008. Ensure that you clearly quote the reference BK/08/26. Candidates should ask their referees to send their references directly to the Administrative Assistant at The Mathematical Institute so that they arrive before the closing date (fax or email is sufficient). It is the responsibility of candidates to ensure that their references arrive by the closing date. Interviews for this position will be held on 27 June 2008.

Oxford University is an Equal Opportunity Employer.

Posted 05/21/08
Programmer Analyst I
National Institutes of Allergy and Infectious Disease, NIH

Position Description:
Position will be part of a microarray core facility to provide computational support for various genomic studies for laboratory and clinical investigators at the National Institutes of Allergy and Infectious Disease at NIH. The successful candidate will be tasked with bioinformatics tool development and maintenance in a well established team environment. Responsibilities will include: parsing and integrating large volumes of biological content from text and XML flat files into our highly integrated public bio-knowledge repository, known as DAVID Knowledgebase (http://david.niaid.nih.gov/knowledgebase); prototyping and optimizing of novel in-house bioinformatics algorithms; designing and implementing computational procedures to support data analysis.

Requirements:
BS/MS degree preferred. Must have considerable familiarity with one or more object-oriented programming computer languages such as Perl, Java and C++. Must demonstrate advanced skills in some of the following areas: OOP, HTML, XML, Unix/Linux, Windows, TCP/IP and system administration, 64-bit systems, Oracle, or JavaScript. Must have a strong interest in bioinformatics.

Desired Skills:
Some knowledge of molecular biology, biological databases (such as Entrez Gene and Gene Ontology) and basic statistical methods is a plus.

Contact:
huangdawei@mail.nih.gov

Posted 05/21/08
Bioinformatics Analyst II
Laboratory of Bioinformatics and Immunopathogenesis, NIH

Position Description:
The Laboratory of Bioinformatics and Immunopathogenesis (http://david.niaid.nih.gov) is seeking a highly motivated microarray data analyst with extensive experience in statistical analysis, data mining approaches, and the use of gene/protein functional annotation tools and programs. A strong background in molecular/cellular biology, immunology and/or virology is required. The individual will be required to work in a highly dynamic team environment in support of a diverse array of genomic studies in collaboration with laboratory and clinical investigators from the National Institute of Allergy and Infectious Disease at NIH. The successful candidate will interact closely with world-class bioinformatics analysts, molecular biologists, immunologists, statisticians and computer programmers.

Requirements:
MS/Ph.D. degree preferred. New Ph.D. graduates are encouraged. Expertise in a several of the following areas: microarray analysis for mRNA expression, mRNA splicing, CHIP-on-Chip, copy-number, and genotype; strong background in molecular/cellular biology, immunology and/or virology; working knowledge of Linux/UNIX/windows and bioinformatics tools (e.g. Partek, R/Bioconductor; BLAST, etc.); and some knowledge of programming languages such as Perl, etc.

Desired Skills:
Knowledge of Oracle database and novel bioinformatics algorithm development is a plus, but not required; Good publication record is desired.

Contact:
huangdawei@mail.nih.gov

Posted 05/19/08
PostDoc Positions
Austrian Academy of Sciences, Linz, Austria

PostDoc Positions f/m at the Johann Radon Institute for Computational and Applied Mathematics (RICAM) of the Austrian Academy of Sciences, Linz, Austria

RICAM (www.ricam.oeaw.ac.at) is a well established mathematical research institute located on the campus of the Kepler University in Linz, Austria and has openings in the following groups:
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